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25560 BRAF V600E/V600K Somatic Mutation Analysis, Tumor (BRAFD)

BRAF V600E/V600K Somatic Mutation Analysis, Tumor (BRAFD)
Test Code: BRAFDSO
Synonyms/Keywords

​​​Anaplastic thyroid carcinoma, BRAF, BRAF mutation, BRAFD, Brain cancer, CNS tumor, Colon cancer, Colorectal cancer, Craniopharyngioma, Erdheim-Chester disease, Glioma, Hairy Cell leukemia, Histiocytic lesion, Lung cancer, Melanoma, Papillary thyroid carcinoma, V600E, V600K

Test Components
Slide review, BRAF Mutation Analysis
Useful For

Therapy selection for patients with cancer (eg, melanomas that may respond to BRAF inhibitors, colon cancers than may not respond to EGFR inhibitors)

Aiding in the diagnosis/prognosis of certain cancers (eg, hairy cell leukemia, papillary thyroid cancers, and association with aggressiveness)

Aid in determining risk for Lynch syndrome (eg, an adjunct to negative MLH1 germline testing in cases where colon tumor demonstrates MSI-H and loss of MLH1 protein expression)

This test is NOT INTENDED as a screening test to identify cancer.

Specimen Requirements
Fasting Required Specimen Type Preferred Container/Tube Acceptable Container/Tube Specimen Volume Specimen Minimum Volume
(allows for 1 repeat)
Pediatric Minimum Volume
(no repeat)
​No ​Tissue ​Formalin-fixed, paraffin-embedded tissue block ​Slides-1 stained and 5 unstained
Collection Processing Instructions

Submit 1 slide stained with hematoxylin and eosin and 5 unstained, nonbaked slides with 5-micron thick section of tumor tissue.

Necessary Information

Pathology report (final or preliminary) must accompany specimen in order for testing to be performed. At minimum, it should contain the following information:

1. Patient name

2. Block number-must be on all blocks, slides and paperwork (can be handwritten on the paperwork)

3. Tissue collection date

4. Source of the tissue

Specimen Stability Information
Specimen Type Temperature
​Varies ​ ​ ​ Ambient (preferred)
​Refrigerated
Rejection Criteria
Specimens that have been decalcified (all methods); specimens that have not been formalin-fixed, paraffin-embedded; bone marrow in EDTA
Interference

Not all tumors that have BRAF alterations respond to BRAF-targeted therapies.

Rare genetic alterations exist that could lead to false-negative or false-positive results.

Test results should be interpreted in context of clinical findings, tumor sampling, and other laboratory data. If results obtained do not match other clinical or laboratory findings, please contact the laboratory for possible interpretation. Misinterpretation of results may occur if the information provided is inaccurate or incomplete.

Colon cancer is relatively common and it is possible for a sporadic colon cancer to occur in a Lynch syndrome family. Therefore, evaluation of other family members should still be considered in cases with MLH1 promoter hypermethylation and absence of the BRAF V600E alteration if there is high clinical suspicion of Lynch syndrome.

This test is not validated for serial monitoring of patients with cancer.

This test cannot differentiate between somatic and germline alterations. Additional testing may be necessary to clarify the significance of results if there is a potential hereditary risk.

Performing Laboratory Information
Performing Location Day(s) Test Performed Report Available Methodology/Instrumentation
​Mayo Clinic Laboratories Varies
​6 to 12 days Digital Droplet Polymerase Chain Reaction (ddPCR)
Reference Lab
Test Information

This test assesses for somatic (tumor-specific) BRAF V600E and V600K alterations. The BRAF gene is a member of the mitogen-activated protein/extracellular signal-regulated (MAP/ERK) kinase pathway, which plays a role in cell proliferation and differentiation. Dysregulation of this pathway is a key factor in tumor progression and BRAF alterations occur frequently in many different tumor types. BRAF variant analysis aids in the diagnosis of cancer types including anaplastic and papillary thyroid carcinoma, hairy cell leukemia, and papillary craniopharyngioma.

BRAF V600E and V600K alterations are associated with response or resistance to specific targeted therapies in cancers such as melanoma, colorectal cancer, and lung cancer. Targeted cancer therapies are defined as antibody or small molecule drugs that block the growth and spread of cancer by interfering with specific cell molecules involved in tumor growth and progression. Multiple targeted therapies have been approved by the US Food and Drug Administration (FDA) for treatment of specific cancers. Molecular genetic profiling is often needed to identify targets amenable to targeted therapies and to minimize treatment costs and therapy-associated risks.

BRAF variant analysis can provide helpful diagnostic information in the context of evaluation for Lynch syndrome.

Reference Range Information
An interpretive report will be provided.
Interpretation
The interpretation of molecular biomarker analysis includes an overview of the results and the associated diagnostic, prognostic, and therapeutic implications.
Outreach CPTs
CPT Modifier
(if needed)
Quantity Description Comments
​81210 ​1
​88381 ​1 ​Slide Review

Synonyms/Keywords

​​​Anaplastic thyroid carcinoma, BRAF, BRAF mutation, BRAFD, Brain cancer, CNS tumor, Colon cancer, Colorectal cancer, Craniopharyngioma, Erdheim-Chester disease, Glioma, Hairy Cell leukemia, Histiocytic lesion, Lung cancer, Melanoma, Papillary thyroid carcinoma, V600E, V600K

Test Components
Slide review, BRAF Mutation Analysis
Ordering Applications
Ordering Application Description
​Cerner

​BRAF V600E/V600K MUT (BRAFD)

If the ordering application you are looking for is not listed, contact your local laboratory for assistance.
Specimen Requirements
Fasting Required Specimen Type Preferred Container/Tube Acceptable Container/Tube Specimen Volume Specimen Minimum Volume
(allows for 1 repeat)
Pediatric Minimum Volume
(no repeat)
​No ​Tissue ​Formalin-fixed, paraffin-embedded tissue block ​Slides-1 stained and 5 unstained
Collection Processing

Submit 1 slide stained with hematoxylin and eosin and 5 unstained, nonbaked slides with 5-micron thick section of tumor tissue.

Necessary Information

Pathology report (final or preliminary) must accompany specimen in order for testing to be performed. At minimum, it should contain the following information:

1. Patient name

2. Block number-must be on all blocks, slides and paperwork (can be handwritten on the paperwork)

3. Tissue collection date

4. Source of the tissue

Specimen Stability Information
Specimen Type Temperature
​Varies ​ ​ ​ Ambient (preferred)
​Refrigerated
Rejection Criteria
Specimens that have been decalcified (all methods); specimens that have not been formalin-fixed, paraffin-embedded; bone marrow in EDTA
Interference

Not all tumors that have BRAF alterations respond to BRAF-targeted therapies.

Rare genetic alterations exist that could lead to false-negative or false-positive results.

Test results should be interpreted in context of clinical findings, tumor sampling, and other laboratory data. If results obtained do not match other clinical or laboratory findings, please contact the laboratory for possible interpretation. Misinterpretation of results may occur if the information provided is inaccurate or incomplete.

Colon cancer is relatively common and it is possible for a sporadic colon cancer to occur in a Lynch syndrome family. Therefore, evaluation of other family members should still be considered in cases with MLH1 promoter hypermethylation and absence of the BRAF V600E alteration if there is high clinical suspicion of Lynch syndrome.

This test is not validated for serial monitoring of patients with cancer.

This test cannot differentiate between somatic and germline alterations. Additional testing may be necessary to clarify the significance of results if there is a potential hereditary risk.

Useful For

Therapy selection for patients with cancer (eg, melanomas that may respond to BRAF inhibitors, colon cancers than may not respond to EGFR inhibitors)

Aiding in the diagnosis/prognosis of certain cancers (eg, hairy cell leukemia, papillary thyroid cancers, and association with aggressiveness)

Aid in determining risk for Lynch syndrome (eg, an adjunct to negative MLH1 germline testing in cases where colon tumor demonstrates MSI-H and loss of MLH1 protein expression)

This test is NOT INTENDED as a screening test to identify cancer.

Test Components
Slide review, BRAF Mutation Analysis
Reference Range Information
An interpretive report will be provided.
Interpretation
The interpretation of molecular biomarker analysis includes an overview of the results and the associated diagnostic, prognostic, and therapeutic implications.
For more information visit:
Performing Laboratory Information
Performing Location Day(s) Test Performed Report Available Methodology/Instrumentation
​Mayo Clinic Laboratories Varies
​6 to 12 days Digital Droplet Polymerase Chain Reaction (ddPCR)
Reference Lab
For billing questions, see Contacts
Outreach CPTs
CPT Modifier
(if needed)
Quantity Description Comments
​81210 ​1
​88381 ​1 ​Slide Review

For most current information refer to the Marshfield Laboratory online reference manual.