Skip Ribbon Commands
Skip to main content
Sign In

26414 Alpha Globin Gene Sequencing, Varies (WASEQ)

Alpha Globin Gene Sequencing, Varies (WASEQ)
Test Code: WASEQSO
Synonyms/Keywords

​Alpha Globin
Alpha Thalassemia
HBA1
HBA2
HB Barts
HB H Disease
Alpha-thalassemia
Hydrops Fetalis
Thalassemia, Alpha
Hemoglobin variant, Alpha
Alpha Globin Sequencing
Alpha Hemoglobin

Useful For

Diagnosing nondeletional alpha thalassemia.

Testing for nondeletional alpha thalassemia in a symptomatic individual.

Follow-up testing to an abnormal hemoglobin electrophoresis that identified an alpha-globin chain variant.

Specimen Requirements
Specimen TypePreferred Container/TubeAcceptable Container/TubeSpecimen VolumeSpecimen Minimum Volume
(allows for 1 repeat)
Pediatric Minimum Volume
(no repeat)
Submit only 1 of the following specimen types:
Whole BloodEDTA ​Lavender Top Tube (LTT) ​Yellow Top Tube(ACD); Sodium-heparin Green Top Tube (GTT)​4 mL​1 mL
Extracted DNA from Whole Blood1.5 to 2-mL tube Entire Specimen50 mcL at 50 ng/mcL concentration
Collection Processing Instructions

Whole Blood:

1. Invert several times to mix blood.

2. Send specimen in the original tube.

Extracted DNA from Whole Blood:

1. Label specimen as extracted DNA and source of specimen

2. Provide volume and concentration of the DNA

Ordering Guidance:

For first-tier testing for alpha thalassemia detection, order THEV1 / Thalassemia and Hemoglobinopathy Evaluation, Serum and Whole Blood.

For first-tier testing for an alpha globin variant, order HBEL1 / Hemoglobin Electrophoresis Evaluation, Blood.

If genetic testing is desired, the first-tier genetic test assesses large deletional alpha thalassemia alterations. Order ATHAL / Alpha-Globin Gene Analysis, Varies.

Necessary Information:

1. Patient's age is required.

2. Include recent transfusion information.

Specimen Stability Information
Specimen TypeTemperatureTime
Whole Blood ​​Refrigerate (preferred)​30 days
​Ambient​14 days
​​Extracted DNA from Whole Blood ​ ​​Frozen (preferred)Stable​ ​ ​
​Refirigerate
​Ambient
Rejection Criteria

Moderately to severely clotted

Interference

This assay will not detect large deletions or duplications within the alpha-globin genes. Therefore, test results should be interpreted in the context of hemoglobin electrophoresis, clinical findings, family history, and other laboratory data. Misinterpretation of results may occur if the information provided is inaccurate or incomplete.

Rare genetic alterations exist that could lead to false-negative or false-positive results. If results obtained do not match the clinical findings, additional testing should be considered.

Performing Laboratory Information
Performing LocationDay(s) Test PerformedAnalytical TimeMethodology/Instrumentation
​Mayo Clinic Laboratories​Monday through Friday​2-10 days​Polymerase Chain Reaction (PCR)/ Sanger Sequencing
Reference Lab
Test Information

A hemoglobin electrophoresis evaluation (HBEL1 / Hemoglobin Electrophoresis Evaluation, Blood) is always indicated prior to alpha globin gene sequencing because these conditions can be complex and protein data allows accurate and rapid classification of the patient phenotype.

Not the preferred first-tier molecular test for carrier screening or diagnosis of alpha thalassemia. This test is used to identify nondeletional alpha-thalassemia variants when there is a strong clinical suspicion and ATHAL / Alpha-Globin Gene Analysis, Varies, is negative. This test can also identify alpha globin variants that can result in variable phenotypes, such as erythrocytosis, chronic hemolytic anemia, and many that are clinically benign.

This test is a second-tier test in the evaluation of alpha thalassemia carrier determination, hemoglobin H disease confirmation, and alpha-globin variant identification.

 

Alpha globin gene sequencing detects alpha globin variants and nondeletional alpha thalassemia variants.

Alpha thalassemia is the most common monogenic condition in the world. It is estimated that up to 5% of the world's population carries at least 1 alpha thalassemia variant and, in the United States, approximately 30% of African Americans are thought to carry an alpha thalassemia variant. Alpha thalassemia variations are most common in individuals of Southeastern Asian, African, Mediterranean, Indian, and Middle Eastern descent, but they can be found in persons from any ethnic group.

Four alpha-globin genes are normally present, 2 copies on each chromosome 16. Alpha thalassemia variants result in decreased alpha-globin chain production. In general, alpha thalassemia is characterized by hypochromic, microcytic anemia and varies clinically from asymptomatic (alpha thalassemia silent carrier and alpha thalassemia trait) to lethal hemolytic anemia (hemoglobin: Hb Barts hydrops fetalis).

Large deletions of the alpha globin genes account for approximately 90% of alpha thalassemia alterations, and these variations will not be detected by alpha-globin gene sequencing. Other variants, such as point alterations or small deletions within the alpha-globin genes, account for most of the remaining 10% of alpha thalassemia variations. These nondeletional subtypes can be detected by alpha globin gene sequencing. The most common nondeletional alpha thalassemia variant is Hb Constant Spring (HbCS).

The majority of alpha globin chain variants are clinically and hematologically benign however, some cause erythrocytosis and chronic hemolytic anemia. Hemoglobin electrophoresis may not be able to confirm their identity. In these instances, alpha-globin gene sequencing can be useful.

Reference Range Information

An interpretive report will be provided.

Outreach CPTs
CPTModifier
(if needed)
QuantityDescriptionComments
81259​​1HBA1/HBA2; full sequence
Synonyms/Keywords

​Alpha Globin
Alpha Thalassemia
HBA1
HBA2
HB Barts
HB H Disease
Alpha-thalassemia
Hydrops Fetalis
Thalassemia, Alpha
Hemoglobin variant, Alpha
Alpha Globin Sequencing
Alpha Hemoglobin

Ordering Applications
Ordering ApplicationDescription
​COM​Alpha Globin Gene Sequencing, Varies (WASEQ)
​Cerner​Alpha Globin Gene Sequencing, Varies (WASEQ)
If the ordering application you are looking for is not listed, contact your local laboratory for assistance.
Specimen Requirements
Specimen TypePreferred Container/TubeAcceptable Container/TubeSpecimen VolumeSpecimen Minimum Volume
(allows for 1 repeat)
Pediatric Minimum Volume
(no repeat)
Submit only 1 of the following specimen types:
Whole BloodEDTA ​Lavender Top Tube (LTT) ​Yellow Top Tube(ACD); Sodium-heparin Green Top Tube (GTT)​4 mL​1 mL
Extracted DNA from Whole Blood1.5 to 2-mL tube Entire Specimen50 mcL at 50 ng/mcL concentration
Collection Processing

Whole Blood:

1. Invert several times to mix blood.

2. Send specimen in the original tube.

Extracted DNA from Whole Blood:

1. Label specimen as extracted DNA and source of specimen

2. Provide volume and concentration of the DNA

Ordering Guidance:

For first-tier testing for alpha thalassemia detection, order THEV1 / Thalassemia and Hemoglobinopathy Evaluation, Serum and Whole Blood.

For first-tier testing for an alpha globin variant, order HBEL1 / Hemoglobin Electrophoresis Evaluation, Blood.

If genetic testing is desired, the first-tier genetic test assesses large deletional alpha thalassemia alterations. Order ATHAL / Alpha-Globin Gene Analysis, Varies.

Necessary Information:

1. Patient's age is required.

2. Include recent transfusion information.

Specimen Stability Information
Specimen TypeTemperatureTime
Whole Blood ​​Refrigerate (preferred)​30 days
​Ambient​14 days
​​Extracted DNA from Whole Blood ​ ​​Frozen (preferred)Stable​ ​ ​
​Refirigerate
​Ambient
Rejection Criteria

Moderately to severely clotted

Interference

This assay will not detect large deletions or duplications within the alpha-globin genes. Therefore, test results should be interpreted in the context of hemoglobin electrophoresis, clinical findings, family history, and other laboratory data. Misinterpretation of results may occur if the information provided is inaccurate or incomplete.

Rare genetic alterations exist that could lead to false-negative or false-positive results. If results obtained do not match the clinical findings, additional testing should be considered.

Useful For

Diagnosing nondeletional alpha thalassemia.

Testing for nondeletional alpha thalassemia in a symptomatic individual.

Follow-up testing to an abnormal hemoglobin electrophoresis that identified an alpha-globin chain variant.

Reference Range Information

An interpretive report will be provided.

For more information visit:
Performing Laboratory Information
Performing LocationDay(s) Test PerformedAnalytical TimeMethodology/Instrumentation
​Mayo Clinic Laboratories​Monday through Friday​2-10 days​Polymerase Chain Reaction (PCR)/ Sanger Sequencing
Reference Lab
For billing questions, see Contacts
Outreach CPTs
CPTModifier
(if needed)
QuantityDescriptionComments
81259​​1HBA1/HBA2; full sequence
For most current information refer to the Marshfield Laboratory online reference manual.