The clearance studies using 24-hour fecal specimens and serum determinations are preferred as it normalizes the large range of serum alpha-1-antitrypsin (AAT) concentrations and the variability in random fecal AAT concentrations. In the absence of either a 24-hour fecal collection or a contemporary serum specimen, the fecal concentration of AAT can be used as a surrogate marker.
When gastric loss of AAT is suspected (eg, Menetrier disease), AAT clearance is not a reliable indicator of protein loss as AAT is sensitive to pH <3 and is rapidly destroyed. When gastric protein loss is suspected and the AAT clearance is normal, the recommendation is to repeat testing after starting an acid suppressive medication regime.