Skip Ribbon Commands
Skip to main content
Sign In

25403 ROS1 (6q22) Rearrangement, FISH, Tissue (ROS1F)

ROS1 (6q22) Rearrangement, FISH, Tissue (ROS1F)
Test Code: FROS1SO
Synonyms/Keywords
Lung carcinoma; Non-small cell lung cancer (NSCLC); Lung Cancer, ROS1 (6q22) Rearrangement, FISH, Tissue (ROS1F); TI FROS1SO 
Useful For
​Identifying c-ros oncogene 1 (ROS1) gene rearrangements in patients with late-stage, lung adenocarcinomas that are negative for epidermal growth factor receptor (EGFR) mutations and anaplastic lymphoma kinase (ALK) rearrangements
Specimen Requirements
Specimen Type Preferred Container/Tube Acceptable Container/Tube Specimen Volume Specimen Minimum Volume
(allows for 1 repeat)
Pediatric Minimum Volume
(no repeat)
Tissue
​FFPE
tumor tissue block
​Slides 4 consecutive, unstained, 5 micron thick sections placed on positively charged slides, and 1 H&E slide ​2 consecutive, unstained, 5 micron thick sections placed on positively charged slides, and 1 H&E slide
Collection Processing Instructions

A pathology report is required in order for testing to be performed. Acceptable pathology reports include working drafts, preliminary pathology or surgical pathology reports. Provide a reason for referral with each specimen. The laboratory will not reject testing if this information is not provided, but appropriate testing and interpretation may be compromised or delayed.

For blocks residing at a Non-Clinic location, please complete the Surgical Pathology Specimen Request form found in FORMS PRINTER or located here:

Surgical Pathology Specimen Request

Specimen Stability Information
Specimen Type Temperature
​ Tissue ​Ambient (preferred)
Refrigerated​
Interference

This test is not approved by the U.S. Food and Drug Administration, and it is best used as an adjunct to existing clinical and pathologic information.

Fixatives other than formalin (eg, Prefer, Bouin) may not be successful for FISH assays, however, nonformalin-fixed samples will not be rejected.

Paraffin-embedded tissues that have been decalcified are generally unsuccessful for FISH analysis. The pathologist reviewing the hematoxylin and eosin-stained slide may find it necessary to cancel testing.

Performing Laboratory Information
Performing Location Day(s) Test Performed Report Available
Methodology/Instrumentation
Mayo Clinic Laboratories ​Monday through Friday
​7-10 days Fluorescence In Situ Hybridization (​FISH)
Reference Lab
Test Information

Lung cancer is the leading cause of cancer mortality in developed countries. The discovery of a variety of genetic alterations in non-small-cell lung cancer (NSCLC) has enabled the use of targeted therapy such as the anaplastic lymphoma kinase (ALK) inhibitor, crizotinib, and the epidermal growth factor receptor (EGFR) tyrosine kinase inhibitor, erlotinib, for NSCLC with ALK rearrangements and EGFR mutations, respectively.

The c-ros oncogene 1 (ROS1), originally described in glioblastomas, has been identified as a potential relevant therapeutic target in lung adenocarcinoma. Crizotinib has shown in vitro activity and early evidence of clinical activity in ROS1-rearranged tumors.

Reference Range Information
Performing Location Reference Range
Mayo Clinic Laboratories​ ​Interpretive Report
Interpretation

​​A neoplastic clone is detected when the percent of cells with an abnormality exceeds the normal cutoff for the probe set.

A positive result suggests rearrangement of the ROS1 locus and a tumor that may be responsive to ALK-inhibitor therapy.

A positive result suggests rearrangement of the c-ros oncogene 1 (ROS1) locus and a tumor that may be responsive to anaplastic lymphoma kinase (ALK)-inhibitor therapy

Outreach CPTs
CPT Modifier
(if needed)
Quantity Description Comments
88291 1 Interpretation and report
​88271​ 2 ​Probe Set, 1ST
​​88271 2 ​Probe, +2 ​as needed
​88271​ ​1 ​Probe, +1 ​as needed
​88271​ ​2 ​Probe, +2 ​as needed
​88271​ ​3 ​Probe, +3 ​as needed
​88274​ ​1 ​Interphases, <25​ ​as needed
​​88274 ​1 ​Interphases, 25-99 ​as needed

​88275


​1
​Interphases, 100-300
​as needed​
Synonyms/Keywords
Lung carcinoma; Non-small cell lung cancer (NSCLC); Lung Cancer, ROS1 (6q22) Rearrangement, FISH, Tissue (ROS1F); TI FROS1SO 
Ordering Applications
Ordering Application Description
COM​​​​ ​ROS1 (6q22) Rearrangement, FISH, Tissue (ROS1F)
​Cerner​ROS1 (6q22) Rearrangement, FISH, Tissue (ROS1F)
If the ordering application you are looking for is not listed, contact your local laboratory for assistance.
Specimen Requirements
Specimen Type Preferred Container/Tube Acceptable Container/Tube Specimen Volume Specimen Minimum Volume
(allows for 1 repeat)
Pediatric Minimum Volume
(no repeat)
Tissue
​FFPE
tumor tissue block
​Slides 4 consecutive, unstained, 5 micron thick sections placed on positively charged slides, and 1 H&E slide ​2 consecutive, unstained, 5 micron thick sections placed on positively charged slides, and 1 H&E slide
Collection Processing

A pathology report is required in order for testing to be performed. Acceptable pathology reports include working drafts, preliminary pathology or surgical pathology reports. Provide a reason for referral with each specimen. The laboratory will not reject testing if this information is not provided, but appropriate testing and interpretation may be compromised or delayed.

For blocks residing at a Non-Clinic location, please complete the Surgical Pathology Specimen Request form found in FORMS PRINTER or located here:

Surgical Pathology Specimen Request

Specimen Stability Information
Specimen Type Temperature
​ Tissue ​Ambient (preferred)
Refrigerated​
Interference

This test is not approved by the U.S. Food and Drug Administration, and it is best used as an adjunct to existing clinical and pathologic information.

Fixatives other than formalin (eg, Prefer, Bouin) may not be successful for FISH assays, however, nonformalin-fixed samples will not be rejected.

Paraffin-embedded tissues that have been decalcified are generally unsuccessful for FISH analysis. The pathologist reviewing the hematoxylin and eosin-stained slide may find it necessary to cancel testing.

Useful For
​Identifying c-ros oncogene 1 (ROS1) gene rearrangements in patients with late-stage, lung adenocarcinomas that are negative for epidermal growth factor receptor (EGFR) mutations and anaplastic lymphoma kinase (ALK) rearrangements
Reference Range Information
Performing Location Reference Range
Mayo Clinic Laboratories​ ​Interpretive Report
Interpretation

​​A neoplastic clone is detected when the percent of cells with an abnormality exceeds the normal cutoff for the probe set.

A positive result suggests rearrangement of the ROS1 locus and a tumor that may be responsive to ALK-inhibitor therapy.

A positive result suggests rearrangement of the c-ros oncogene 1 (ROS1) locus and a tumor that may be responsive to anaplastic lymphoma kinase (ALK)-inhibitor therapy

For more information visit:
Performing Laboratory Information
Performing Location Day(s) Test Performed Report Available
Methodology/Instrumentation
Mayo Clinic Laboratories ​Monday through Friday
​7-10 days Fluorescence In Situ Hybridization (​FISH)
Reference Lab
For billing questions, see Contacts
Outreach CPTs
CPT Modifier
(if needed)
Quantity Description Comments
88291 1 Interpretation and report
​88271​ 2 ​Probe Set, 1ST
​​88271 2 ​Probe, +2 ​as needed
​88271​ ​1 ​Probe, +1 ​as needed
​88271​ ​2 ​Probe, +2 ​as needed
​88271​ ​3 ​Probe, +3 ​as needed
​88274​ ​1 ​Interphases, <25​ ​as needed
​​88274 ​1 ​Interphases, 25-99 ​as needed

​88275


​1
​Interphases, 100-300
​as needed​
For most current information refer to the Marshfield Laboratory online reference manual.